Workshops
No upcoming workshops planned at this stage.
Past Workshops
24th International Conference on Arabidopsis Research 2013 (Sydney, Australia, 24-28 June 2013)
Workshop, 2:30 to 4:00 pm (Friday 28th June)
Joshua Heazlewood (Lawrence Berkeley National Laboratory, USA)
Alexandra Jones (The Sainsbury Laboratory, UK)
Harvey Millar (The University of Western Australia, Australia)
XV International Congress on Molecular Plant-Microbe Interactions (Kyoto, Japan, July 29 - 2 August 2012)
Workshop Organizers:
Alex Jones (Sainsbury Laboratory, UK)
Hirofumi Nakagami (RIKEN Plant Science Center, Japan)
Jesús Jorrín Novo (University of Cordoba, Spain)
23rd International Conference on Arabidopsis Research 2012 (Vienna, Austria, 3-7 July 2012)
Proteomics Workshop, 4:30 to 6:00 pm (Friday 6th July)
Workshop organizers:
Wolfram Weckwerth (University of Vienna, Austria)
Stefanie Wienkoop (University of Vienna, Austria)
22nd International Conference on Arabidopsis Research 2011 (Madison, Wisconsin, USA, 22-25 June 2011)
MASC Subcommittee Workshop, 12:10 to 1:15 (Friday, 25th June)
Joshua Heazlewood (Lawrence Berkeley National Labs, USA)
Irene Lavagi, MASC Coordinator (University of Warwick, UK)
Joanna Friesner, NAASC Coordinator (University of California, Davis, USA)
21st International Conference on Arabidopsis Research 2010 (Yokohama, Japan, June 6-10 2010)
MASCP Proteomics Workshop 2010, 12:45 to 13:45 (Monday, 7th June, Room 315).
Joshua Heazlewood (Lawrence Berkeley National Labs, USA)
Alex Jones (Sainsbury Laboratory, UK)
Hiro Nakagami (RIKEN Plant Science Center, Japan)
20th International Conference on Arabidopsis Research 2009 (Edinburgh, Scotland, 30 June - 4 July 2009)
MASCP Proteomics Workshop 2009 (Tuesday, 30th June from 4:00-5:30pm)
Harvey Millar (The University of Western Australia, Australia)
Wolfram Weckwerth (University of Vienna, Austria)
Joshua Heazlewood (Lawrence Berkeley National Labs, USA)
Alex Jones (Sainsbury Laboratory, UK)
19th International Conference on Arabidopsis Research 2008 (Montreal, Canada, 23-27 July 2008)
MASCP Proteomics Workshop 2008 (Friday, July 25th from 7:00 - 8:30 pm)
Workshop organizers:
Harvey Millar (The University of Western Australia, Australia)
Klaas van Wijk (Cornell University, Ithaca, New York, USA)
Joshua Heazlewood (Joint BioEnergy Institute, Emeryville, California, USA)
SessionTitlePresenterInstiute
MASCP Subcommitte 5 minIntroduction to MASC Proteomics, Standards and the WorkshopHarvey MillarUWA, Australia
New Arabidopsis Proteomic ResourcesJoshua HeazlewoodJBEI, USA
How The Plant Cell Reviews Functional Genomics PapersScott PeckMissouri, USA
Quantitative proteomics of chloroplast protein biogenesis and homeostasis mutantsKlaas van WijkCornell, USA
Invited Talks 15 minTranscript, Protein and Metabolite Analysis of Arabidopsis thaliana TrichomesBerit EbertMPIMP, Germany
Parallel microarray and proteomic analysis of a seed-specific acetyl-CoA carboxylase mutant reveals assorted changes in metabolismMingjie ChenMissouri, USA
Analysis of MAPK signaling networks using Arabidopsis thaliana protein microarraysSorina PopescuYale, USA
Discussion and Questions
18th International Conference on Arabidopsis Research 2007 (Beijing, China, 20-23 June 2007)
MASCP Proteomics Workshop 2007 (Thursday, June 21, 7:30 - 9:30 pm)
Workshop organisers:
Wolfram Weckwerth (Max Planck Institute Molecular Plant Physiology, Germany)
Harvey Millar (The University of Western Australia, Australia)
SessionTitlePresenterInstitute
General introductionNeeds, trends, methods, databasesH.MillarH.P.Mock
W.Weckwerth
Cell BiologyTowards understanding translational control: Systematic analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its protein complement and their post-translational modification.Adam CarrollUWA, Australia
Hormonal ResponsesProteomic and genomic studies of the brassinosteroid signal transduction pathway.Zhi-Yong WangStanford, USA
Cell BiologyUnderstanding Arabidopsis peroxisomal proteomes.Jianping HuMSU, USA
Responses to the EnvironmentProteome analysis of the cold stress response in Arabidopsis thaliana.Hans-Peter MockIPK, Germany
General discussion
Poster presentation and individual talks
15th International Conference on Arabidopsis Research 2004 (Berlin, Germany, 11-14 July 2004)
Proteomics in Arabidopsis (Monday 12th July 2004, 20:00 - 22:30)
Workshop organizers:
Harvey Millar, The University of Western Australia
Hans-Peter Braun, University of Hannover
Part I: State of the art: Proteomics in Arabidopsis
TitlePresenterInstitute
Gel-based proteomics.Hans-Peter BraunUniversität Hannover, Hannover, Germany
Shot gun proteomics.Joshua HeazlewoodThe University of Western Australia
Differential proteomics and quantitative proteomics.Hans-Peter MockInstitute for Plant Genetics and Crop Plant Resarch, Germany
Integration of proteomic data and bioinformatic data.Dario LeisterMax Planck Institute for Plant Breeding Research, Germany.
Proteomic/mass spectrometry standards.Harvey MillarThe University of Western Australia, Australia.
Part II: Open discussion
- perspectives of proteomics for Arabidopsis research
- annotation of proteome data
Workshop, 2:30 to 4:00 pm (Friday 28th June)
- Using proteomics to identify receptor complexes and signaling events
Joshua Heazlewood (Lawrence Berkeley National Laboratory, USA)
Alexandra Jones (The Sainsbury Laboratory, UK)
Harvey Millar (The University of Western Australia, Australia)
- Introduction: Proteomic resources and the Arabidopsis proteomics subcommittee - Joshua Heazlewood (Lawrence Berkeley National Laboratory, USA)
- Integrating genetics and phosphoproteomics reveals a protein phosphorylation network in the Abscisic acid signaling pathway in Arabidopsis - Taishi Umezawa (Tokyo University, Japan)
- Redox-regulation of the SUMO E2 in plant immunity - Michael Skelly (University of Edinburgh, UK)
- Proteome and metabolome profiling of cytokinin action in Arabidopsis identifying both distinct and similar responses to cytokinin down- and up-regulation - Martin Cerny (Mendel University in Brno, Czech Republic)
- Proteomics of model plant systems to identify mechanisms essential for plant salt tolereance - Bronwyn Barkla (Universidad Nacional Autónoma de México, Mexico)
XV International Congress on Molecular Plant-Microbe Interactions (Kyoto, Japan, July 29 - 2 August 2012)
- Proteomics in plant pathology, challenges and advances
Workshop Organizers:
Alex Jones (Sainsbury Laboratory, UK)
Hirofumi Nakagami (RIKEN Plant Science Center, Japan)
Jesús Jorrín Novo (University of Cordoba, Spain)
- Phosphoproteomic approaches for signaling pathway dissection - Hirofumi Nakagami, RIKEN
- Natural Variation/Comparative Genomics - Alex Jones, Sainsbury Laboratory
- The world of 2-DE - Jesús Jorrín Novo, University of Cordoba
23rd International Conference on Arabidopsis Research 2012 (Vienna, Austria, 3-7 July 2012)
Proteomics Workshop, 4:30 to 6:00 pm (Friday 6th July)
Workshop organizers:
Wolfram Weckwerth (University of Vienna, Austria)
Stefanie Wienkoop (University of Vienna, Austria)
- Introduction - Wolfram Weckwerth (University of Vienna, Austria)
- SUBA an update - Sandra Tanz University of Western Australia, Australia)
- QCONCAT in combination with epitope tagging - Klaas Jan van Wijk (Cornell University, USA)
- Absolute Quantification - Stefanie Wienkoop (University of Vienna, Austria)
22nd International Conference on Arabidopsis Research 2011 (Madison, Wisconsin, USA, 22-25 June 2011)
MASC Subcommittee Workshop, 12:10 to 1:15 (Friday, 25th June)
- Overview and Update of MASC Subcommittees
Joshua Heazlewood (Lawrence Berkeley National Labs, USA)
Irene Lavagi, MASC Coordinator (University of Warwick, UK)
Joanna Friesner, NAASC Coordinator (University of California, Davis, USA)
- Introduction - Joshua Heazlewood
- Natural Variation/Comparative Genomics - Brian Dilkes (Purdue University, USA)
- ORFeomics - Joe Ecker (Salk Institute, USA)
- Proteomics - Katja Bärenfaller (ETH Zurich, Switzerland)
- Metabolomics - Basil Nikolau (Iowa State University, USA)
- Bioinformatics - Nick Provart (University of Toronto, Canada)
- Phenomics - Joshua Heazlewood(Lawrence Berkeley National Labs, USA)
- Systems Biology - Rodrigo Gutierrez (Pontificia Universidad Católica de Chile, Chile)
21st International Conference on Arabidopsis Research 2010 (Yokohama, Japan, June 6-10 2010)
MASCP Proteomics Workshop 2010, 12:45 to 13:45 (Monday, 7th June, Room 315).
- Plant Proteomics - A focus on phosphorylation.
Joshua Heazlewood (Lawrence Berkeley National Labs, USA)
Alex Jones (Sainsbury Laboratory, UK)
Hiro Nakagami (RIKEN Plant Science Center, Japan)
- Introduction to the MASC Proteomics Subcommittee - Joshua Heazlewood (LBNL USA)
- Focusing on phosphorylation. - Alex Jones (Sainsbury Lab, UK)
- Phosphoproteomics in plants.- Hiro Nakagami (RIKEN, Japan)
- An online Arabidopsis proteomics data aggregator. - Hiren Joshi (LBNL USA)
- General discussion
20th International Conference on Arabidopsis Research 2009 (Edinburgh, Scotland, 30 June - 4 July 2009)
MASCP Proteomics Workshop 2009 (Tuesday, 30th June from 4:00-5:30pm)
- Plant Proteomics - breakthroughs in studying intra-cellular dynamics and environmental response in the Arabidopsis proteome.
Harvey Millar (The University of Western Australia, Australia)
Wolfram Weckwerth (University of Vienna, Austria)
Joshua Heazlewood (Lawrence Berkeley National Labs, USA)
Alex Jones (Sainsbury Laboratory, UK)
- Introduction to the MASC Proteomics Subcommittee Workshop - Harvey Millar (UWA, Australia)
- Integrating metabolomics and proteomics: a how-to guide.Wolfram Weckwerth (UniVie, Austria)
- Mining online Arabidopsis proteomic resources.Joshua Heazlewood (LBNL USA)
- Recent advances to aid phospho-peptide analysis.Alex Jones (Sainsbury Lab, UK)
- 15N metabolic labeling as a tool to study stress-induced dynamic changes in plasma membrane protein composition in Arabidopsis - Waltraud Schulze (MPIMP Germany)
- Mapping of the Arabidopsis ER and post-ER glycoproteome - Alexander van der Krol (Wageningen University, The Netherlands)
- Towards dissecting the trans Golgi network using proteomics and chemical genomics - Georgia Drakakaki (University of California, Riverside, USA)
- Guided discussion with attendees on topics of interest, new resources etc
19th International Conference on Arabidopsis Research 2008 (Montreal, Canada, 23-27 July 2008)
MASCP Proteomics Workshop 2008 (Friday, July 25th from 7:00 - 8:30 pm)
Workshop organizers:
Harvey Millar (The University of Western Australia, Australia)
Klaas van Wijk (Cornell University, Ithaca, New York, USA)
Joshua Heazlewood (Joint BioEnergy Institute, Emeryville, California, USA)
SessionTitlePresenterInstiute
MASCP Subcommitte 5 minIntroduction to MASC Proteomics, Standards and the WorkshopHarvey MillarUWA, Australia
New Arabidopsis Proteomic ResourcesJoshua HeazlewoodJBEI, USA
How The Plant Cell Reviews Functional Genomics PapersScott PeckMissouri, USA
Quantitative proteomics of chloroplast protein biogenesis and homeostasis mutantsKlaas van WijkCornell, USA
Invited Talks 15 minTranscript, Protein and Metabolite Analysis of Arabidopsis thaliana TrichomesBerit EbertMPIMP, Germany
Parallel microarray and proteomic analysis of a seed-specific acetyl-CoA carboxylase mutant reveals assorted changes in metabolismMingjie ChenMissouri, USA
Analysis of MAPK signaling networks using Arabidopsis thaliana protein microarraysSorina PopescuYale, USA
Discussion and Questions
18th International Conference on Arabidopsis Research 2007 (Beijing, China, 20-23 June 2007)
MASCP Proteomics Workshop 2007 (Thursday, June 21, 7:30 - 9:30 pm)
Workshop organisers:
Wolfram Weckwerth (Max Planck Institute Molecular Plant Physiology, Germany)
Harvey Millar (The University of Western Australia, Australia)
SessionTitlePresenterInstitute
General introductionNeeds, trends, methods, databasesH.MillarH.P.Mock
W.Weckwerth
Cell BiologyTowards understanding translational control: Systematic analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its protein complement and their post-translational modification.Adam CarrollUWA, Australia
Hormonal ResponsesProteomic and genomic studies of the brassinosteroid signal transduction pathway.Zhi-Yong WangStanford, USA
Cell BiologyUnderstanding Arabidopsis peroxisomal proteomes.Jianping HuMSU, USA
Responses to the EnvironmentProteome analysis of the cold stress response in Arabidopsis thaliana.Hans-Peter MockIPK, Germany
General discussion
Poster presentation and individual talks
15th International Conference on Arabidopsis Research 2004 (Berlin, Germany, 11-14 July 2004)
Proteomics in Arabidopsis (Monday 12th July 2004, 20:00 - 22:30)
Workshop organizers:
Harvey Millar, The University of Western Australia
Hans-Peter Braun, University of Hannover
Part I: State of the art: Proteomics in Arabidopsis
TitlePresenterInstitute
Gel-based proteomics.Hans-Peter BraunUniversität Hannover, Hannover, Germany
Shot gun proteomics.Joshua HeazlewoodThe University of Western Australia
Differential proteomics and quantitative proteomics.Hans-Peter MockInstitute for Plant Genetics and Crop Plant Resarch, Germany
Integration of proteomic data and bioinformatic data.Dario LeisterMax Planck Institute for Plant Breeding Research, Germany.
Proteomic/mass spectrometry standards.Harvey MillarThe University of Western Australia, Australia.
Part II: Open discussion
- perspectives of proteomics for Arabidopsis research
- annotation of proteome data
